Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015874346.1_cds_XP_016435458.1_31416
CDS Infomation

[gene=LOC107761714] [db_xref=GeneID:107761714] [protein=calreticulin-like isoform X2] [protein_id=XP_016435458.1] [location=complement(join(53948..54064,54209..54238,54624..54671,54745..54840,54961..55028,55120..55177,55257..55343,55715..55973,56075..56279,56387..56494,57372..57480))] [gbkey=CDS]
Sequence

ATGGCTACTCAACGAAGGGCAAACCCTAGCTCTCTCCATCTAATTACTGTATTCTCTCTG
CTTGTCGCTGTCGTCTCCGCTGAGGTCTTCTTCGAGGAGAGTTTCAACGATGGTTGGGAA
AGCAGGTGGGTGAAATCTGAATGGAAGAAAGATGAAAACATGGCTGGAGAGTGGAATCAC
ACATCTGGCAAGTGGAATGGAGACGCTAATGACAAAGGTATCCAAACCAGTGAAGACTAC
AGGTTCTTTGCCATTNTCTATGCCATCTCAGCTGAGTTCCCTGAATTTAGCAACAAGGGA
AAAAACTTAGTGTTCCAGTTCTCTGTGAAGCATGAGCAGAAGCTTGACTGTGGTGGTGGG
TACATGAAGTTGCTTAGTGGGGACGTTGACCAAAAGAAATTCGGTGGTGACACTCCCTAC
AGCATCATGTTTGGCCCAGACATCTGTGGCTACAGCACCAAGAAGGTCCATGCTATTCTC
ACTTATAATGACACAAACCACTTGATCAAGAAGGAAGTACCTTGTGAGACTGATCAACTG
ACCCATGTCTACACTTTCATCCTCCGCCCTGATGCTACATACAGCATTCTCATTGATAAT
GTGGAGAAACAGTCTGGTAGCTTGTACTCTGATTGGGACCTTCTCCCACCAAAGACAATC
AAGGATCCAAGTGCCAAGAAGCCAGAGGACTGGGATGATCAAGAAGATGGTGAATGGACA
GCCCCAACCATTCCCAACCCCGAGTACAAGGGCCCATGGAAGCCAAAGAAAATTAAGAAC
CCCAACTACAAGGGGAAGTGGAAGGCTCCTTTGATTGACAACCCAGACTTCAAGGATGAC
CCAGATCTCTATGTTTTCCCAAATCTGAAGTATGTGGGAGTTGAACTGTGGCAAGTGAAA
TCTGGAACCTTGTTTGACAATATTGTCATATGCGACGATCCAGAGTATGCCAAGGCAATT
GCTGAAGAAACATGGGGAAAGCAGAAGGATGCGGAAAAGGCTGCTTTTGAGGAAGCAGAA
AAGAAGAGAGAGGAGGAGGAATCAAAGGCTGCTCCAGCTGATTCTGATGCCGAGGAAGAT
GATGATGCCGATGATGATTCTGATGATGCTGATGACAAGTCGGAGTCCAAGGATGATGAA
GCGCATGTAAGAATTGTATCTTGTTTAAGTTTCAAGCAGAGCTAG

Peptide Sequence

PEP ID

XP_016435458.1
PEP Infomation

PREDICTED: calreticulin-like isoform X2 [Nicotiana tabacum]
Sequence

MATQRRANPSSLHLITVFSLLVAVVSAEVFFEESFNDGWESRWVKSEWKKDENMAGEWNH
TSGKWNGDANDKGIQTSEDYRFFAIXYAISAEFPEFSNKGKNLVFQFSVKHEQKLDCGGG
YMKLLSGDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTYNDTNHLIKKEVPCETDQL
THVYTFILRPDATYSILIDNVEKQSGSLYSDWDLLPPKTIKDPSAKKPEDWDDQEDGEWT
APTIPNPEYKGPWKPKKIKNPNYKGKWKAPLIDNPDFKDDPDLYVFPNLKYVGVELWQVK
SGTLFDNIVICDDPEYAKAIAEETWGKQKDAEKAAFEEAEKKREEEESKAAPADSDAEED
DDADDDSDDADDKSESKDDEAHVRIVSCLSFKQS

Transcript Sequence

Gene sequence data has not been registered.